Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSNLWKKGTDFLGSEFAIMGGAMSWVSERNLVSAISNAGGFGVIACGAMSSDLLEKEIIETQKLTNKPFGVNLITMHPNLSELIDVCIETKVSHIVLAGGLPVKPNIEKIKNVGIEVMCFAPSLSLAKRLVKMGVDALIIEGMEAGGHIGPVSTSVLSQEILPYFKDERVPVFVAGGIGRGEMIVNYLEMGASGCQIGTLFVCTNESIAHKNFKEVFIKSAARDAISSVQISADFPVIPVRAIANKASDDFMQYQKEIIDKYHKGQISKEDGQLEIEKFWAGALRGAVIEGDIETGSLMAGQSVGMVDKEKPVKEVIDILIQQASNYIESKSVKVGDLIISKASS |
| 4QCC Chain:A ((5-274)) | --TKL---------PLIAILRGITPDEALAHVGAVIDA--GFDAVEIP-LNSPQWEQSIPAIVDAYGDKALIGAGTVLK--PEQVDALARMGC-QLIVTPNIH-SEVIRRAVGYGMTVCPGCATATEAFTALEAGAQALKIF---PSSAFGPQYIKALKA-VLP----SDIAVFAVGGVTP-ENLAQWIDAGCAGAGLGSDLYRAGQS----------------------------------------VERTAQQAAAFVKAYREAQKQKEQRQDQKSAYALGASLGRYMENSLKEQEKLGIK----LDKDQLIAGVQDAFADKSKL-----SDQEIEQTLQAFEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192731 for 2113 contacts (-91.2/contact) +
2D Compatibility (PS) -28707 + (NN) -5892 + (LL) 5464
1D Compatibility (HY) -3200 + (ID) 2500
Total energy: -227566.0 ( -107.70 by residue)
QMean score : 0.428
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