Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIPHKERIIPYLDYVDEQAINAGAVNTVLIK--DGKWIGYNTDGIGYVKGLHSV-YPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRTMARFESWNLNINQ-ISLADAEKYLAEFDIVINTTPAGMAGNNES-IINLKHLSPNTLMSDIVYIPYKTPILEEAERKGNHIYNGLDMFVYQGAESFKIWTNKDADINSMKTAVLQQLKGE |
| 2O7S Chain:A ((235-512)) | KVYGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVD--NLVSFLQAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGL-------TVVVIGAGGAGKALAYGAKEKGA--VVIANRTYERALELAEAIGGALSLTDLDNY-EDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFEIFTGLPAPKELYWQIMS------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2O7S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -139134 for 2213 contacts (-62.9/contact) +
2D Compatibility (PS) -26113 + (NN) -2610 + (LL) 1040
1D Compatibility (HY) -15200 + (ID) 4500
Total energy: -186517.0 ( -84.28 by residue)
QMean score : 0.490
|
|
|