Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWY----TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPGIKYDFEKVFQSHHNMMVAHARAVKLFKDGGYQGEIGVVHALPTKYPFDPSNPEDVRAAELEDIIHNKFILDATYLGKYSRETMEGVQHILSVNGGKLNITDEDYAILDAAKDLNDFLGINYYMSDWMRGYDGESEITHNATGDKGGSKYQLKGVGQREFDVDVPRTDWDWMIYPQGLYDQIMRVVKDYPNYHKIYITENGLGYKDEFIESEKTVHDDARIDYVRQHLNVIADAIKDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQERYPKKSAYWYKELAETKEIK |
| 1UG6 Chain:A ((6-424)) | ------EKFLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGSTGEPACDHYRRYEEDIALMQSLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALEERGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPGLR-NLEAALRAAHHLLLGHGLAVEALRAAGAR-RVGIVLN------FAPAYGEDPEAVDVADRYHNRFFLDPI-LGK-------GYPESPFRDPPPVPILSRDLELV--ARPL-DFLGVNYYAP--VRVAPGTGTLPVRYLPPEG------------------PATAMGWEVYPEGLYHLLKRLGREVP--WPLYVTENGAAYPDLWT-GEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRRFGLYYVDFPSQRRIPKRSALWYRE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190297 for 3789 contacts (-50.2/contact) +
2D Compatibility (PS) -43619 + (NN) -13697 + (LL) 3108
1D Compatibility (HY) -30000 + (ID) 7800
Total energy: -282305.0 ( -74.51 by residue)
QMean score : 0.670
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