Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYKIIAIDIDGTLLNDTHEITPAVRDSIKAAKAKGVKVVLCTGRPLAGIKKSLIELDLLDEGDYAITFNGAVVLETASEKTLADITLNKTELEEIYAFCHAEN-VNVTYFDGKNMYVPSRKITEITCQDSLLLGTP-LYHLPVEEAPESIHVSKVMLL-DSPEKITDVIKKLPENIKEKFYVVRSVPYNLEFLQKGVNKGSALASLADKLGVDQSEVMSIGDQENDITMIEYAGMGVAMGNATEHIKEIANY--TTTTNNEDGVAQAIQMLILDR
3PGV Chain:A ((21-284))-YQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGI---RSYMITSNGARVHDS-DGQQIFAHNLDRDIAADLFEIVRNDPKIVTNVYREDEWYMNRHR-----FFKEAVFNYKLYEPGELD--P--QGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLYL--


General information:
TITO was launched using:
RESULT:

Template: 3PGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141310 for 2144 contacts (-65.9/contact) +
2D Compatibility (PS) -28262 + (NN) -11635 + (LL) 1520
1D Compatibility (HY) -17600 + (ID) 3200
Total energy: -200487.0 ( -93.51 by residue)
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_3PGV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PGV-query.scw
PDB file : Tito_Scwrl_3PGV.pdb: