Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAVVVNQASTGVEVVEHDLPKVGHGEALVKVEYCGVCHTDLHVAHGDFGQVPGRI-----------LGHEGIGIVEEIGEGVTSLRVGDRVSI-AWFFEGCGHCEYCTTGRETLCRSVKNAGYSVDGGMSEYAVVT-ADYAVKVPEGLDPAQASSITCAGVTTYKAIKEAGAAPGQ-WIAVYGAGGLGNLAVQYAKKVFNAHVVAVDINADKLQLAKEVGADLTVNGKEIKDVAAYIQE--KTGGCHGVVVTAVSKVAFNQAIDSVRAGGTVVAVGLPSEYMELSIVKTVLDGIRVVGSLVGTRKDLEEAFAFGAEGLVVPVVEK-VPVDTAPQVFDEMERGLIQGRKVLDFTK |
| 1R37 Chain:B ((1-345)) | MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNL--RIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPW--QGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA-SMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R37.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213903 for 2967 contacts (-72.1/contact) +
2D Compatibility (PS) -35534 + (NN) -6069 + (LL) -68
1D Compatibility (HY) -24400 + (ID) 5700
Total energy: -285674.0 ( -96.28 by residue)
QMean score : 0.504
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