Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKVRLYIARHGKTMFNTIGR---------------------------AQGW----SDTPLTTFGELGIKELGLGLKASNISFKEAFSSDSGRTLQTMEIILREVQQE-NIPYTRDKRIREWC-----FGSLDGGYDGDLFNGVLPRVSNGDMSHLTHEEIANLICQVDTAGWAEPWAILSNRILSGFTAIAKKIEDIGGGNAIVVSHGMTIATFLWLIDHSTP---RS-----LGIDNGSVSVVDFED--GTFSIQSIGD-MSYREKGREILEKTLQ |
| 3D4I Chain:A ((8-267)) | -SRRGILVIRHGERVDQVFGKSWLQQCTTADGKYYRPDLNFPRSLPRRSNGIKDFENDPPLSSCGIFQARLAGEALLDSGVRVTAVFASPALRCVQTAKHILEELKLEKKLKIRVEPGIFEWMKWEASKATLTFLTLEELK-EANFNVDLDYRPA----------LPRCSLMPAESYDQYVERCAVSMGQIINTCP-QDMGITLIVSHSSALDSCTRPLLGLPPRECGDFAQLVRKIPSLGMCFCEENREDGKWDLV-NPPVKTLTHGANSVFNWRNW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55463 for 1664 contacts (-33.3/contact) +
2D Compatibility (PS) -22374 + (NN) -4707 + (LL) 1152
1D Compatibility (HY) -8400 + (ID) 1950
Total energy: -91742.0 ( -55.13 by residue)
QMean score : 0.267
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