Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNCIFCKIISGEIPSSKVYEDDEVLAFLDITQTTTGHTLLIPKKHVRNVLEMDEKTAQITFERLPKVARAVQAATK-AKGMNIINNNEEIAGQTVFHAHVHLVPRFDESDGIKIHYTTHEPDFEALAKLAKEIRKEIQL
3O1C Chain:A ((15-122))
-GDTIFGKIIRKEIPAKIIFEDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMI-VGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG--------------------------
General information:
TITO was launched using:
RESULT:
Template:
3O1C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46064 for 753 contacts (-61.2/contact) +
2D Compatibility (PS) -11317 + (NN) -1583 + (LL) 2288
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: -65576.0 ( -87.09 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_3O1C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O1C-query.scw
PDB file :
Tito_Scwrl_3O1C.pdb
: