Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLELKNISKCYGQKEIF-----KDFNLTVEEGKILSLVGPSGGGKTTLLRMLAGLEKIDSGTIVHDG-----KEVSVDHLETLNLLGFVFQDFQLFPHLTVLDNLILSPVKTMGLSKELAKAKALVLLERLGL-KDHALVYPFSLSGGQKQRVALARAMMIDPQIIGYDEPTSALDPELRQEVEKLILQ-NRETGMTQIVVTHDLQFAESISDTILKINPK
4MKI Chain:B ((7-222))
-IKVENVSFIYNEGTPYATVALKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSLKDIRKQVGLVFQYPEYQLFEE-TVFKDIAFGP-SNLGLSEEEVKERVYEAMEIVGISKELADKSPFELSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILNKIKEIHDKYKMITILVSHNMEDIARIADKIIVMNRG
General information:
TITO was launched using:
RESULT:
Template:
4MKI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84541 for 1523 contacts (-55.5/contact) +
2D Compatibility (PS) -22848 + (NN) -14310 + (LL) 576
1D Compatibility (HY) -16400 + (ID) 3550
Total energy: -141073.0 ( -92.63 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_4MKI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MKI-query.scw
PDB file :
Tito_Scwrl_4MKI.pdb
: