Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTPLYKALIQHARRNSHSFHVPGHHNGDVFFDDAKSIFDPLLTIDVTELAGLDDLHHPSGVIKEAQELASQLYGSAESFFLVNGTTVGNLAMILSVCEPGDTILV---QRNCHKSVFHAVDLSGAEPVYLAPDVDSAMHVPTHVPLGTIKEALEAYPDAKGLVL--TNPTYYGHS---ADLTEIITEAHHYGIPVLVD--EAHGAHFILGEPFPVSALKMGADIVVQSAHKTLPAMTMGSYLHLNSSCRINRDRVAEYLNRLQSSSPSY---PIMASLDIARAYVQHIIEEQKLSDILQRIETLKQTFDSLTNAEAVNPANPLIITDPLKLTIRSKRGHSGYTLQSILERANIFTELADENQVLLVLPLGGKRRINAEIIRSIDEEIEKTPPDQTFVSAEWGVQPVTVLPYPKKVLHSFKKEYVSFEEAAGRLNAEDIIPYPPGIPMIMAGERITKESVQKLSRLISMKTHVQGNMKIKEKQLLVYIEEEKS |
1JG8 Chain:A ((5-347)) | --------------------------MIDLRSDTVTKPTEEMRKAMAQA-EVGDDVYGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAH-TQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGK--N-GAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNA--SIASGVPVKEYAGYADSVMFCLSK-GLCAPVGSVVVGD---RDFIERARKARKML-------GGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEI-GYSVN--PEDVK---TNMVILRTDN-------LKV-NAHGFIEALRNSG-----------------------------------VLANAVS-------------------------------------DT-EIRLVTHK-DVSRNDIEEALNIFEKLFRKFS------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1JG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -161060 for 2884 contacts (-55.8/contact) +
2D Compatibility (PS) -34959 + (NN) -11652 + (LL) 9528
1D Compatibility (HY) -2800 + (ID) 2600
Total energy: -203543.0 ( -70.58 by residue)
QMean score : 0.407
|
|
|