Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKFKKNFLVGLSAALMSISLFSATASAASTDYWQNWTDGGGIVNAVNGSGGNYSVNWSNTGNFVVGKGWTTGSPF-------RTINYNAGVWAPNGNGYLTLYGWTRSPLIEYYVVDSWGTYRPTG-TYKGTVKSDGGTYDIYTTTRYNAPSIDGDRTTFTQYWSVRQSKRPTGSNATITFSNHVNAWKSHGMNLGSNWAYQV-MATEGYQSSGSSNVTVW
1QH6 Chain:B ((16-194))---------------------------------YEFWKDSGGSGTMILNHGGTFSAQWNNVNNILFRKGKKFNETQTHQQVGNMSINYGAN-FQPNGNAYLCVYGWTVDPLVEYYIVDSWGNWRPPGATPKGTITVDGGTYDIYETLRVNQPSIKG-IATFKQYWSVRRSKRTSG---TISVSNHFRAWENLGMNMGK--MYEVALTVEGYQSSGSANV---


General information:
TITO was launched using:
RESULT:

Template: 1QH6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 908 25686 28.29 151.09
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : 28.29
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.564

(partial model without unconserved sides chains):
PDB file : Tito_1QH6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QH6-query.scw
PDB file : Tito_Scwrl_1QH6.pdb: