Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMINVLIVEDDPMVGELNKRYLSQIDGFQLKGIASSFQSALHILGEHHIDLILLDIYMPGKNGLELLTELRAQNEAVDVIVISAASELDVIKKTLRYGAVDYLIKPFEFERFQTALSDYRRKQKVYSTHRNMSQKELDAELFQKK-EATEKVQLPKGLTKSTLKLIWSSIQSFEN-ESFTTEDLAKHTEISQVSIRKYLKFLEDIQVLNVEMAYGTIGRPVFQYNVNNSNINGIKQYL
1KGS Chain:A ((3-208))-VRVLVVEDERDLADLITEALKK-EMFTVD-VCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRRKSESKS-TKLVCG---DLILDTATKKAYRGSKEIDLTKKE-YQILEYLVMN-KNRVVTKEELQEHLWVFSDVLRSHIKNLRKKVDKGFK---------------------------


General information:
TITO was launched using:
RESULT:

Template: 1KGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 862 -72387 -83.98 -363.75
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -83.98
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.635

(partial model without unconserved sides chains):
PDB file : Tito_1KGS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KGS-query.scw
PDB file : Tito_Scwrl_1KGS.pdb: