Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANMLEVKHINKTYKGQVSYQALKQISFSIEEGEFTAVMGPSGSGKTTLLNIISTIDRPDSGDILINGENPHRLKRTKLAHFRRKQLGFVFQDFNLLDTLTIGENIML--PLTLEKEAPSVME-EKLHGIAAKL--GIENLLNKRTFEVSGGQRQRAAIARAVIHKPSLILADEPTGNLDSKATKDVMETLQSLNRDDHVTALMVTHDPVSASYCRRVIFIKDGELFNEIYRGENRQVFYEQILDVLSMLGGNANDLSSVRL
2ONJ Chain:A ((340-566))----IDIDHVSFQYNDNEA-PILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSL----RNQIGLVQQD-NILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDR--TTLIVAHRLSTITHADKIVVIENGHI---VETGTHRELIAKQ--------------------


General information:
TITO was launched using:
RESULT:

Template: 2ONJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1139 -10335 -9.07 -46.55
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -9.07
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.454

(partial model without unconserved sides chains):
PDB file : Tito_2ONJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ONJ-query.scw
PDB file : Tito_Scwrl_2ONJ.pdb: