Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKRRTQEERSAATREALITGARKLWGLRGYAEVGTPEIATEAGVTRGAMYHQFADKAALFRDVVEVVEQDVMARMATLVAASGAATPADAIRAAVDAWLEVS-GDPEVRQLILLDAPVVLGWAGFRDVAQRYSLGMTEQLITEAIRAGQLARQPVRPLAQVLIGALDEAAMFIATADDPKRARRETRQVLRRLIDGMLNG
3QKX Chain:A ((3-187))
--------RQAKTDLAEQIFSATDRLMAREGLNQLSMLKLAKEANVAAGTIYLYFKNKDELLEQFAHRVFSMFMATLEKDFDE--TKPFFEQYRQMWKNIWYFLQENPTILSNLKQYES----LPNFKDICKNIKNCRWDLFCHQAQKAGLLAELSEDILFLLSLKTAINLASDAKFI----LKPEILESVIERSWRAIQ--
General information:
TITO was launched using:
RESULT:
Template:
3QKX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92216 for 1218 contacts (-75.7/contact) +
2D Compatibility (PS) -19334 + (NN) -4755 + (LL) 660
1D Compatibility (HY) -8800 + (ID) 1400
Total energy: -125845.0 ( -103.32 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_3QKX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QKX-query.scw
PDB file :
Tito_Scwrl_3QKX.pdb
: