Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVSFKMRPAQPR
2V19 Chain:C ((3-65))
--VYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIAGTIGEAGVKEYQVVLEVGFRL------
General information:
TITO was launched using:
RESULT:
Template:
2V19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23598 for 397 contacts (-59.4/contact) +
2D Compatibility (PS) -7128 + (NN) -5267 + (LL) 364
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -42279.0 ( -106.50 by residue)
QMean score : 0.666
(partial model without unconserved sides chains):
PDB file :
Tito_2V19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V19-query.scw
PDB file :
Tito_Scwrl_2V19.pdb
: