Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFPGA
3FKB Chain:D ((9-138))
--ERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPL-ASAPGSIRGDFGVDVGRNIIGGSDSVESANREIALWF---
General information:
TITO was launched using:
RESULT:
Template:
3FKB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87125 for 1005 contacts (-86.7/contact) +
2D Compatibility (PS) -14062 + (NN) -5018 + (LL) 212
1D Compatibility (HY) -12400 + (ID) 3500
Total energy: -121893.0 ( -121.29 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_3FKB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FKB-query.scw
PDB file :
Tito_Scwrl_3FKB.pdb
: