Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAVVKSVALAGRPTTPDRVHEVLGRSMLVDGLDIVLDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKTQVC---GVMAG-RRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTA--DRDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALPVVT |
| 4JF1 Chain:A ((37-418)) | --------------------------------APADFIPVKGKGSRVWDQ-QGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHT-S-NV----FTNEPALRLGRKLIDAT--FAERVLFMNSGTEANETAFKLARHYACVRHSP------FKTKIIAFHNAFHGQSLFTVSVGGQPKYSD-GFGPKPADIIHV-----PF----------NDLHAVKAVMD---DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPVSAMLTTQEIASAF-----------STYGGNPLACAVAGATFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFD-IFSDIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAGADVMRFAPSLVVEEADIHEGMQRFAQAVGKV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JF1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252834 for 3359 contacts (-75.3/contact) +
2D Compatibility (PS) -40527 + (NN) -20366 + (LL) 4480
1D Compatibility (HY) -17200 + (ID) 5150
Total energy: -331597.0 ( -98.72 by residue)
QMean score : 0.535
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