Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDRIDELRRAEGIDA
3OP9 Chain:A ((7-110))
-QHQFAENLSRLKKEH------GLKNHQIAELL-----NVQTRTVAYYMSGET-KPDIEKLIRLATYFHLSIDELVGYVQE--VWND---------LSLKQWLLSLNLRSEEEIAKIKILVDTVET------
General information:
TITO was launched using:
RESULT:
Template:
3OP9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34401 for 582 contacts (-59.1/contact) +
2D Compatibility (PS) -11063 + (NN) -4185 + (LL) 1656
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -53093.0 ( -91.23 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_3OP9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OP9-query.scw
PDB file :
Tito_Scwrl_3OP9.pdb
: