Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDAVPAGNFVPPLILHSDHGGSAMSSSAHRGRI-LHFLGDPAKLGDKAWEYFEDGLLWIEHGHVRALDHATYLLPQLPADLPLEEHPQRLLLPGFVDCHVHYPQLGVIASY---GTQLLDWLETHTFPAEQRFADAGYAAAQAELFLDELLRHGTTTALVFGTVHAV--SAEAFFQAAQKRRLRMIAGKVLMDRNAPPALCDTAASGYAESRALIERWHG---NGRLQYAVTPRFAPTSSPEQLAAAARLLDEYPGVYLHTHLSENLKEVAWVGELFPQAQDYLDVYHRAGLVGERSVFAHGIHLSERECRCLAHKNAALAHCPSSNLFIGSGLFDLGRAQQYGIRVGIGSDVGGG-TSLSLLANLADAYKIQQLR--GTSLDPFQALYLATLGGARALDLDGLVGNFLPGREADFVALDLAATPMIAQRMEHARGLADTLFVLNTLGDDRAVAETWVMGERRHVKG |
| 3HPA Chain:A ((29-453)) | ------------------------KTLLVKHADVLVTMD--------DTRRELRDAGLYIEDNRIVAVGPSAELP---ETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAAQNAELFGWLTNLYKIW-AH-LTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRGAMS----------EPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREY-GVSLHTHLAENVNDIAY---------TPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLASGIAPVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVGFGPDAMTAREALEIATLGGAKVLNRD-DIGALKPGMAADFAAFDLRQPLFAG-------ALHDPVAALVFCA-PSQTAYTVVNGKVVVREG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254801 for 3625 contacts (-70.3/contact) +
2D Compatibility (PS) -42243 + (NN) -20154 + (LL) 1980
1D Compatibility (HY) -15200 + (ID) 5100
Total energy: -335518.0 ( -92.56 by residue)
QMean score : 0.511
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