Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKQILVLPGDGIGPEIMAEAVKVLELANDRFQLG---FELAEDVIGGAAIDKHGVPLADQTLQRARQADAVLLGAVGGPKWDRIERDIRPERG-LLKIRSQLGLFANLRPAILYPQLAAASSLKPEVVAGLDILIVRELTGGIYFGQP-------REQRVLENGERQAYDTLPYSESEIRRIARVGFDMARVRNNRLCSVDKANVLASSQLWREVVEEVAKDY--PDVELSHMYVDNAAMQLVRAPKQFDVMVTDNMFGDILSDEASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFSQATAADAIEQAVSKVLDQGLRTGDIW--SEGCRKVGTREMGDAVVAALKNL |
| 1A05 Chain:A ((1-357)) | -MKKIAIFAGDGIGPEIVAAARQVLDAVDQAA---HLGLRCTEGLVGGAALDASDDPLPAASLQLAMAADAVILGAVGGPRWDAYPPAKRPE-QGLLRLRKGLDLYANLRPAQIFPQLLDASPLRPELVRDVDILVVRELTGDIYFGQPRGLEVID--------GKRRGFNTMVYDEDEIRRIAHVAFRAAQGRRKQLCSVDKANVLETTRLWREVVTEVAR-DYP-DVRLSHMYVDNAAMQLIRAPAQFDVLLTGNMFGDILSDEASQLTGSIGMLPSASLGE-GRAMYEPIHGSAPDIAGQDKANPLATILSVAMMLRHSLNAEPWAQRVEAAVQRVLDQGLRTADIAAP--GTPVIGTKAMGAAVVNALNLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213903 for 3039 contacts (-70.4/contact) +
2D Compatibility (PS) -36984 + (NN) -13790 + (LL) 1028
1D Compatibility (HY) -35200 + (ID) 10550
Total energy: -309399.0 ( -101.81 by residue)
QMean score : 0.637
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