Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLMAR
3F0G Chain:F ((24-178))
FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHF----------DSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVV--
General information:
TITO was launched using:
RESULT:
Template:
3F0G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121365 for 1241 contacts (-97.8/contact) +
2D Compatibility (PS) -15846 + (NN) -8835 + (LL) 132
1D Compatibility (HY) -15200 + (ID) 4350
Total energy: -165464.0 ( -133.33 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_3F0G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0G-query.scw
PDB file :
Tito_Scwrl_3F0G.pdb
: