Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQKPVCLVVAMTPKRGIGINNGLPWPHLTTDFKHFSRVTKTTPEEASRLNGWLPRKFAKTGDSGLPSPSVGKRFNAVVMGRKTWESMPRKFRPLVDRLNIVVSSSLKEEDIAAEKPQAEGQQRVRVCASLPAALSLLE-EEYKDSVDQIFVVGGAGLYEAALSLGVASHLYITRVAREFPCDVFFPAFPGDDILSNKSTAAQAAAPAESVFVPFCPELGREKDNEATYRPIFISKTFSDNGVPYDFVVLEK-
4DFR Chain:A ((1-159))---MISLIAALAVDRVIGMENAMPW-NLPADLAWFKRNTL---------------------------------DKPVIMGRHTWESIG---RPLPGRKNIILSSQ----------P--GTDDRVTWVKSVDEAIAACGDVP------EIMVIGGGRVYEQFLPK--AQKLYLTHIDAEVEGDTHFPDYEPDDWESVFS----------------------EFHDAD-----------AQNSHSYCFKILERR


General information:
TITO was launched using:
RESULT:

Template: 4DFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119527 for 1165 contacts (-102.6/contact) +
2D Compatibility (PS) -17476 + (NN) -8374 + (LL) 5136
1D Compatibility (HY) -12400 + (ID) 2900
Total energy: -155541.0 ( -133.51 by residue)
QMean score : 0.381

(partial model without unconserved sides chains):
PDB file : Tito_4DFR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DFR-query.scw
PDB file : Tito_Scwrl_4DFR.pdb: