Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWNSSDANFSCYHESVLGYRYVAVSWGVVVAVTGTVGNVLTLLALAIQPKLRTRFNLLIANLTLADLLYCTLLQPFSVDTYLHLHWRTGATFCRVFGLLLFASNSVSILTLCLIALGRYLLIAHPKLFPQVFSAKGIVLALVSTWVVGVASFAPLWPIYILVP----VVCTCSFDRIRGRPYTTILMGIY---FVLGLSSVGIFYCLIHRQVKRAAQALDQYKLRQA---SIHSN----------HVARTDEAMPGRFQELDSRLA-------SGGPSEGISSEPVSAATTQTLEGDS-SEVGDQINSKRAK-------QMAE---------------KSPPEAS---AKAQ-----PIKGAR----------RAPDSSSEFGKVTRM----CFAVFLCFALSYIPFLLLNILDARVQAPRVV---HMLAANLTWLNGCINPVLYAAMNRQFRQAYGSILKRGPRSFHRLH |
| 4EJ4 Chain:A ((24-447)) | -----------------------------VCAVGLLGNVLVMFGIVRYTKLKTATNIYIFNLALADALATSTL-PFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTQPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDINRRDPLVVAALHLCIA-LGYANSSLNPVLYAFLDENFKRC---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219403 for 2277 contacts (-96.4/contact) +
2D Compatibility (PS) -34883 + (NN) -1279 + (LL) 2668
1D Compatibility (HY) -26000 + (ID) 4700
Total energy: -283597.0 ( -124.55 by residue)
QMean score : 0.254
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