Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSPSNATVPCGFLLQGFSEFPHLRPVLFLLLLGVHLATLGGNLLILVAVASMPSRQPMLLFLCQLSAIELCYTLVVVPRSLVDLSTPGHRRGSPISFLSCAFQMQMFVALGGAECFLLAAMAYDRYVAICHPLRYAAVVTPGLCARLALACCLRGLAVSVGLTVAI------------FHLPFCGSRLLLHFFCDITALLHLACTRSYADELPLLGACLVLLLLPSVLILASYGAI-AAALRRLR----CPKGRGKAASTCALHLAVTF-------------LH-YGCATFMYVRPRASYSPRLDRTLALVYTNVTPLLCPLIYSLRNREITAAL-----SRVLGRRRPGQAPGGDLREL |
| 2YDO Chain:A ((77-320)) | ----------------------------------------------------------------------------------------------------CLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVT-GTRAKGIIAICWV-LSFAIGLTPMLGWNNCGQPKEGKAHSQGCGEGQVACLFEDVVPMNYMVYFNFFA-----------CVLVPLLLMLGVYLRIFLAARRQLKQMES--------TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFC--PDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAAAAENLYF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139161 for 1202 contacts (-115.8/contact) +
2D Compatibility (PS) -20959 + (NN) -11607 + (LL) 7668
1D Compatibility (HY) -19600 + (ID) 3300
Total energy: -186959.0 ( -155.54 by residue)
QMean score : 0.127
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