Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPVGKLVFNQSEPTEFVFRAFTTATEFQVLLFLLFLLLYLMILCGNTAIIWVVCTHSTLRTPMYFFLSNLSFLELCYTTVVVPLMLSNILGAQKPISLAGCGAQMFFFVTLGSTDCFLLAIMAYDRYVAICHPLHYTLIMTRELCTQMLGGALGLALFPSLQLTALIFTLPFCGH---HQEINHFLCDVPPVLRLACADIRVHQAVLYVVSILVLTIPFLLICVSYVFITCAILSIRSAEGRRRAFSTCSFHLTVVLLQYGCCSLVYLRPRSSTSEDEDSQIALVYTFVTPLLNPLLYSLRNKDVKGALRSAIIRKAASDAN
2YCZ Chain:A ((9-224))-------------------------QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWA--------ISALVSFLPIMMHWWRDEDPQALKCYQDP----GCCDFVTNRAYAIASSIISFYIPLL------IMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSP


General information:
TITO was launched using:
RESULT:

Template: 2YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -194400 for 1389 contacts (-140.0/contact) +
2D Compatibility (PS) -21517 + (NN) -5200 + (LL) 4008
1D Compatibility (HY) -17200 + (ID) 2650
Total energy: -236959.0 ( -170.60 by residue)
QMean score : 0.302

(partial model without unconserved sides chains):
PDB file : Tito_2YCZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YCZ-query.scw
PDB file : Tito_Scwrl_2YCZ.pdb: