Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVNLTSMSGFLLMGFSDERKLQILHALVFLVTYLLALTGNLLIITIITVDRRLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMGNGYISLVQCILQVFFFIALASSEVAILTVMSYDRYAAICQPLHYETIMDPRACRHAVIAVWIAGGLSGLMHAAINFSIPLCGKRVIHQFFCDVPQMLKLACSYEFINEIALAAFTTSAAFICLISIVLSYIRIFSTVLRIPSAEGRTKVFSTCLPHLFVATFFLSAAGFEFLRLPSDSSSTVDLVFSVFYTVIPPTLNPVIYSLRNDSMKAALRKMLSKEELPQRKMCLKAMFKL
4LDO Chain:A ((199-377))--------------------------------------GNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFL------PIQMHWYRATHQEAINC--YAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKFALKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQELLCL-------------


General information:
TITO was launched using:
RESULT:

Template: 4LDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143755 for 1236 contacts (-116.3/contact) +
2D Compatibility (PS) -18370 + (NN) -95 + (LL) 5188
1D Compatibility (HY) -10000 + (ID) 2350
Total energy: -169382.0 ( -137.04 by residue)
QMean score : 0.263

(partial model without unconserved sides chains):
PDB file : Tito_4LDO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LDO-query.scw
PDB file : Tito_Scwrl_4LDO.pdb: