Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAANESSEGISFVLLGLTTSPGQQRPLFVLFLLLYVASLLGNGLIVAAIQASPALHAPMYFLLAHLSFADLCFASVTVPKMLANLLAHDHSISLAGCLTQMYFFF-ALGVTDSC-LLAAMAYDCYVAIRHPLPYATRMSRAMCAALVGMAWLVSHVHSLLYILLMARLSFCASHQVPHFFCDHQPLLRLSCSDTHHIQLLIFTEGAAVVVT------PFLLI----LASYGAIAAAVLQLPSASGRLR--------AVSTCGSHLAVVSLFYGTVIAVYFQATSRRE--AEWGRVATVMYTVVTPMLNPIIYSLWNRDVQGALRALLIGRRISASDS |
| 2YCW Chain:A ((17-297)) | ---------------------------LMALVVLLIVA---GNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMM-------------HWWRDEDP-QALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCR-SPDFRKAFKRLLAF-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251165 for 1872 contacts (-134.2/contact) +
2D Compatibility (PS) -26404 + (NN) -12281 + (LL) 3892
1D Compatibility (HY) -27600 + (ID) 3700
Total energy: -317258.0 ( -169.48 by residue)
QMean score : 0.239
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