Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQSNYSSLHGFILLGFSNHPKMEMILSGVVAIFYLITLVG---NTAIILASLLDSQLHTPMYFFLRNLSFLDL-----CFTTSIIPQML-VNLWGPDKTISYVGCIIQLYVYMWLGSVECLLLAVMSYDRFTAICKPLHYFVVMNPHLCLKMIIMIWSISLANSVVLCTLTLNLPTCGNNILDHFLCELPALVKIACV-------DTTTVEMSVFALGIIIVLTPLILILISYGYIAKAVLRTKSKASQRKAMNTCGSHLTVVSM--------------FYGTIIYMYLQPGNRASKDQGK-FLTL--FYTVITPSLNPLIYTLRNKDMKDALKKLMRFHHKSTKIKRNCKS |
| 4PXF Chain:A ((37-317)) | --------------------------FSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGP------TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG-VAFTWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTV--KEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGS----DFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206438 for 1763 contacts (-117.1/contact) +
2D Compatibility (PS) -24644 + (NN) 890 + (LL) 4372
1D Compatibility (HY) -22400 + (ID) 3250
Total energy: -251470.0 ( -142.64 by residue)
QMean score : 0.208
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