Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESENRTVIREFILLGLTQSQDIQLLVFVLVLIFYFIILPGNFLIIFTIKSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSAKKIISYRGCITQLFFLHFLGGGEGLL-LVVMAFDRYIAICRPLHYPTVMNPRTCYAMMLALWLGGFVHSIIQVVLILRLPF-CGPNQLDNFFCDVPQVIKLAC------------TDTFVVELLMV-FNSGLMTL-LCFLGLLASYAVILCRIRGSSSEAKNKAMSTCITHIIVIFFMF------GPGIFIYTRPFRAF-PADKVVSLFHTVIFPLLNPVIYTLRNQEVKASMKKVFNKHIA |
3DQB Chain:A ((53-317)) | ---------------------------------------PINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFAT-LGGEIALWSLVVLAIERYVVVCKPMS-----NFRF-----------GENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -189067 for 1768 contacts (-106.9/contact) +
2D Compatibility (PS) -24455 + (NN) -8662 + (LL) 6720
1D Compatibility (HY) -21600 + (ID) 3400
Total energy: -240464.0 ( -136.01 by residue)
QMean score : 0.207
|
|
|