Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANLDKYTETFKMGSNSTSTAEIYCNVTNVKFQYSLYATTYILIFIPGLLANSAALWVLCRFISKKNKAIIFMINLSVADLAHVLSLPLRIYYYISHHWPFQRALCLLCFYLKYLNMYASICFLTCISLQRCFFLLKPFRARDWKRRYDVGISAAIWIVVGTACLPFPILRSTDLNNNKSCFADLGYKQMNAVALVGMITVAELAGFVIPVIIIAWCTWKTTISLRQPPMAFQGISERQKALRMVFMCAAVFFICFTPYHINFIFYTM-VKETIISSCPVVRIALYFHPFCLCLASLCCLLDPILYYFMASEFRDQLSRHGSSVTRSRLMSKESGSSMIG |
4XT3 Chain:A ((26-316)) | ----------------EDATPCVFTDVLNQSKPVTLF--LYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDH----ASVPCTLLTACFYVAMFASLCFITEIALDR-YYAIVYMRYRPVKQA--CLFSIFWWIFAVIIAIPHFMVVT---KKDNQCMTDYDYLEVSYPIILNVELM--LGAFVIPLSVISYCYYRIS-----RIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261035 for 2136 contacts (-122.2/contact) +
2D Compatibility (PS) -28981 + (NN) -6911 + (LL) 3216
1D Compatibility (HY) -30400 + (ID) 3700
Total energy: -327811.0 ( -153.47 by residue)
QMean score : 0.118
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