Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASKDFAIGMILLSQIM--VGFLGNFFLLYHYSFLCFTRGMLQSTDLILKHLTIANSLVILSKGIP-QTMAAFGLKDSLSDIGCKFVFYVHRVGRAVCVGNACLLSVFQVIT----ISPSEFRWAELKLHAHKYIRSFILVLC-WILNTLVNITVLLHVTGKW--NSINSTKTNDYGYCSGGSRSRIPHSLHIVLLSSLDVLCLGLMTLASGSMVFILHRHKQQVQHIHGTNLSARSSPESRVTQSILVLVSTLCYFTRSPPSLHMSLFPNPSWWLLNTSALITACFPMVSPFVLMSRHPRIPRLGSACCGRNPQFPKLVR |
| 4DKL Chain:A ((17-169)) | ------AITIMALYSIVCVVGLFGNFLVM--YVIVRYTK-MKTATNIYIFNLALADALA--TSTLPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPR---------NAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DKL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63315 for 929 contacts (-68.2/contact) +
2D Compatibility (PS) -14437 + (NN) -4449 + (LL) 1796
1D Compatibility (HY) -16800 + (ID) 2000
Total energy: -99205.0 ( -106.79 by residue)
QMean score : 0.131
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