Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKLVIIENMAEIMLFSLDLLLFSTDILCFNFPSKMIKLPGFITIQIFFYPQASFGISANTILLLFHIFTFVFSHRSKSIDMIISHLSLIHILLLFTQAILVSLDFFGSQNTQDDLRYKVIVFLNKVMRGLSICTPCLLSVLQAIISP-S-IFSLAKLKHPSASHILGFFLFSWVLNMFIGVIF-CCTLRLPPVKRGQSSVCHTALFLFAHELH-PQ---ET-----VFHTNDFEGCHLYRVHGPLKRLHGDYFIQTIRGYLSAFTQPACPRVSPVKRASQAIL-LLVSFVFTYWVDFTFSFSGGVTWI-----------NDSLLVWLQVIVANSYAAISPLMLIYADNQIFKTLQMLWFKYLSPPKLMLKFNRQCGSTKK |
| 2LNL Chain:A ((38-322)) | ----------------------------------------NKYVVIIAYALVFLLSLLGNSLVMLVILYS---RVGRSVTDVYLLNLALADLLFALT--LPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTL----TQ-KRHLVKFVCLGCWGLSMNLSLPFFLFR-QAYHPN-------------NSSPVCYEVLGNDTAKWRMVLRILPHTFGFIV----PLFVMLFCYGFTLRT-LF---K----AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183971 for 1849 contacts (-99.5/contact) +
2D Compatibility (PS) -26615 + (NN) -5295 + (LL) 7660
1D Compatibility (HY) -16400 + (ID) 1600
Total energy: -226221.0 ( -122.35 by residue)
QMean score : 0.175
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