Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILQSEVMSKDEGVKTEESNEFTGGIYFCSTEGSGLIDDDYSNIGEVSTEKNGALEEQLG---DMSQELELEH--VCKMFP
2VRP Chain:A ((83-135))
----------------------------CSSEWSDGSSVSYENLIDLHTKKCGALEKLTGFRKWVNYYCEQMHAFVCKLLP
General information:
TITO was launched using:
RESULT:
Template:
2VRP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5310 for 169 contacts (31.4/contact) +
2D Compatibility (PS) -4930 + (NN) 1355 + (LL) 1856
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -159.0 ( -0.94 by residue)
QMean score : -0.068
(partial model without unconserved sides chains):
PDB file :
Tito_2VRP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VRP-query.scw
PDB file :
Tito_Scwrl_2VRP.pdb
: