Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDYLRISIGSLNEKNFHVIYTNKKYHLIAEDLQNISTIDQTSLYVKDIIKRVLLIGSTSIVISHNHSSGNTQPSSRIYPSLGS
3RZV Chain:A ((98-139))
----------------------------------------CNTENEEELFLIQDQQGLITLGWIHTHPTQTAFLSSVDLHTHCS
General information:
TITO was launched using:
RESULT:
Template:
3RZV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2105 for 162 contacts (-13.0/contact) +
2D Compatibility (PS) -4496 + (NN) -2091 + (LL) 3064
1D Compatibility (HY) 2000 + (ID) 250
Total energy: -3878.0 ( -23.94 by residue)
QMean score : 0.100
(partial model without unconserved sides chains):
PDB file :
Tito_3RZV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RZV-query.scw
PDB file :
Tito_Scwrl_3RZV.pdb
: