Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------MFEIFTQDFFINSL----IAIVIISLVTGALG------SFMIWQRLSYLGDSLSHSSLLGIALALIFKISPSISI--------------------------MLIAIVFAILLSLNFNRLY---------SVDTILNIVTNVVLSSSLIL---MSFLPSSNSSIISSLFGN--------ILTLEQSDIVLISLTSIVVVLILIFRW------------RYWLIISINQD----LAIVEKVNVNLVRLEFLITLAIFIAVSAQLIGILL---IAAFLLIPAASSRLISKTPMQMIIVATVFSL----ISGISGLILSASFDL----LTGPAIILTATTYL---IIAYFIRLMLNRLA------------ |
| 4OYF Chain:A ((9-416)) | EYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -285662 for 2098 contacts (-136.2/contact) +
2D Compatibility (PS) -27685 + (NN) -10912 + (LL) 0
1D Compatibility (HY) -21200 + (ID) 2850
Total energy: -348309.0 ( -166.02 by residue)
QMean score : 0.219
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