Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKDEKSKTLFEVEGAVTALLPAA--EFRVKLDNEHEIICHVSGKVRRSKIRIIIGDRVLVEMSIYDRNAKKGRIIRRLKGTSDRTISK
2CUJ Chain:A ((42-107))
---NEKEKELCQV----VRLVPGAYLEYKSALLNE----CHKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYITKA-----------
General information:
TITO was launched using:
RESULT:
Template:
2CUJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25280 for 408 contacts (-62.0/contact) +
2D Compatibility (PS) -6506 + (NN) 587 + (LL) 1732
1D Compatibility (HY) -2800 + (ID) 1200
Total energy: -33467.0 ( -82.03 by residue)
QMean score : 0.190
(partial model without unconserved sides chains):
PDB file :
Tito_2CUJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CUJ-query.scw
PDB file :
Tito_Scwrl_2CUJ.pdb
: