Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIIKFVLLLPTILLILTAGVYLSVRLKWLQIFRLPHALSLIGVKKGENKFSSIAALFTILGGNLGVGNISGTAVALKTGGPGSILWMAIIVIITSVIKYVTCYLSIKNRKKKNGRFIGGPMAYMVDAFNSRKATVVFLVIMIMVSIIVGNLVQVNSLSIPLDMINVPVVTGGIIMTIIFFVVAALSLKKIKIFISAMIPIMTISYLTLCGIILFKFSENILPSLKLITSSFFTTSSFNFGLSLGLVLEMLTIIQVGTLRGIFATDIGLGLEGIVHSSIIPKKNNNKFIIEQSLITIISPFIVAFIVFITTMVLLVTDSWVTGLESTNMCIFAFRKAMNWPYIDYLIMAIMFCFAFTTIFTWFFCSKQTIRYVSQNDKYTKIWIIIFTAVIPLGSISKVQLLWDVADISIAALLFINILAILKLTSRDPEVFTVSSRYLKLNQPIFNKNKTRNWLAILILRG |
| 2KV9 Chain:B ((741-752)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TANNPLYKEATS----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 2429 for 41 contacts (59.2/contact) +
2D Compatibility (PS) -1166 + (NN) -292 + (LL) 40936
1D Compatibility (HY) -400 + (ID) 100
Total energy: 41407.0 ( 1009.93 by residue)
QMean score : 0.230
|
|
|