Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIKLFFIFTLLFFDASTYCSCEDIIESIEICKEYTCQQYIGNEDFIEHKILGLSSKDLCVYIEKQDNDEMVCHHSKYGMMMEKKYLESIFKVGNQEINDFIDIANLRAKECFFISNQKTSYTNRDYIIKE------AVESNFDVLSQYND-----IKS-----IFFDKESVNKMVSEMKKFNLRSSRAAKEEILDNFNSKVVSLDSILYLSPDTWKIWVNRKLFTNTKNLKVYSVTENYVTFVWTVNQKMTKKQPNDSKNVYFGYGNIMFTLYPKQKFDLDSLSIK |
| 2IID Chain:A ((147-264)) | ---------------------------------------------------------------------------SEAGKSAGQLYEESLGKV----------VEELKRTNCSYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIFAYEKRFDEIVDGMDKLPTAMYRDIQDKV--HFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVHYRSGTKIFLTCTTKFWEDDGIHGGKS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IID.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 671 for 509 contacts (1.3/contact) +
2D Compatibility (PS) -10218 + (NN) -282 + (LL) 6680
1D Compatibility (HY) -6800 + (ID) 1550
Total energy: -11499.0 ( -22.59 by residue)
QMean score : 0.210
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