Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLITLTYNNFKQYAQQGTVPAVEQNNGSKVLQNSFYKSV--YYINSVLWPIKGMLVGVKHDLNTSGITMGRREKVVWGTDAMIAILALQIYYLYSIQELHILCTCQKNYFHISKEQKARNLS
2ZFY Chain:A ((89-106))
-------------------------------GNCFYRAFGFSHLEALLD-------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZFY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -517 for 47 contacts (-11.0/contact) +
2D Compatibility (PS) -1403 + (NN) 629 + (LL) 8244
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 5553.0 ( 118.15 by residue)
QMean score : -0.312
(partial model without unconserved sides chains):
PDB file :
Tito_2ZFY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZFY-query.scw
PDB file :
Tito_Scwrl_2ZFY.pdb
: