Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNYIQNSGTRVIRDELQATGKVRENEDQPVENIKITNDHAFYKLICEKLVQGDFSVEQFNLLHYDISEKMIEKPFTIKEINDFCEKNDIPLFTVNELLTLVPKDDIKCYVDYETDSVRNHDHGYIADQINIKASYIKADLVNHQSYQDYITDSDTYYGFIYKKLIVSDALEKLERGETEAQIRESLGNINRKEIKELLEKVPQGSLKEWLSDPANKGYTDVEYHVLYEKISEELVHTSMSINRIKEIYDKYGIVPPTESEFESLKKVQGEKRSIEYHEQKTGLTFQGRINLNVTDNNADNEFSLNIDLFQNKNFEDLTDQNGDGVINNEGLLKSLEDTVKTFNEVFGIKKDNNPLLVYGNIANFRLFLFESKESYQKYLSGDHDAHIPGGGVAQFSDNNYISNMYSHAENARSDFNGDKEGNCKDYNYVIKHELVHALTFYLTSKLDLGKVLMEGLAEYVTHLTEGEKPADFAKLVGEEYKEHTLEEIIKGAVDPYQTGAAIIAYIEETYPNFIDNLLYAATEDRKTLNGRFYFKEMMQKIYQSEEDKIQKGEGFSNWVKTYSSAENITIEPGHAQHEQQAVGNEKDEAQSYSSKGQVSEDRTEVHPTGSFRGLEVPKKPVIHEQNKGQENIVLKDTILKIEKSYERDSEGKHKANVIIDYYDMKALYDRVAGAKKQSVLKFWNKLAESEYKVGALSEDKYYFKDGKFVIHDSNEKKLVVLPEDKVSIKIMKDGNHYDLAISNKEGKVISSITKIDNLNYELLLDISDFSLEAQDSTTFSDQHNEYDLYLENGLVKMFDCASDHIYHDHSLI |
4AW8 Chain:A ((58-137)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTFEDIKAYYRKGYVTNV-------ETIGIENGVIEFHRDNNVASCKYNYAGYKILTYASGKKGVRYLFECKDANSKAPKYVQFSDHIIAPRKSAHFHIFMGNTSQQALLQEMENWPTYYPYQLKANEVVDEMLHH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6649 for 418 contacts (15.9/contact) +
2D Compatibility (PS) -8715 + (NN) -2604 + (LL) 44624
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: 34404.0 ( 82.31 by residue)
QMean score : 0.073
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