Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEQDKIFTNLSGKETPLLKGAKKRGSWQKTKELLDLGSEKIIDEVRKSGLRGRGGAGFSTGLKWSFMPKNPSKEQPTYLVVNADESEPGTCKDRDILRYEPHKLLEGVLLASRAISASVAYIYIRGEFYNEYLVLKQALEEAYKEGLIGKNACKSSYDLNVFIHRGAGAYICGEETAQLESIEGKKGFPRMKPPFPAGVGLFGCPTTINNVETIAMVPDILYRGGEWFASLGKPNNTGTKIFCV-SGHVNNPCNVEEEL-GIPLRELIEEYAGGVRGGWD-NLLAVIPGGSSVSLIPKSICDIIKMDFDSLRAAQSGLGTAAVIVMDKSTDIIAAIERLSHFYMHESCGQCTPCREGTGWMWRIMKRMVTGNIKHGEIDKLLDLTTQIEGNTICALGDAAAWPIQGLIRHFRHVIEERAITKLSVY |
| 4COG Chain:A ((83-156)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IHCIGAAPVVRPADVEAALDGVPPRVLLRTYARAAVEQWDSNFCAVAP--DTVDLLAAHGVKLIGIDTPSLDPQESKTMDAHRRVRAHRMAILEGIVLDDVPPGDYELIALPLKFATLDASPVRAVLRALP------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4COG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30774 for 468 contacts (-65.8/contact) +
2D Compatibility (PS) -7370 + (NN) -407 + (LL) 16424
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -29427.0 ( -62.88 by residue)
QMean score : 0.245
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