Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEQKIQAFEWFRALRDRVVESFLLIEGQSPTDPKIEKRKWDRPGGGGGESTIIY-GDVFEKVGVNISKVYGKFADSVVNEI--------------PGASESNG-EFWASGISLVSHMQSPLVPAAHMNTRLIYTSKQ-------WFGGGMDFTPTYKNEEDYKYIHESIKTTCDKFDAEYYLKFKEQCDNYFFLQHRKEPRGIGGIFYDNLNSGRWENDFEFTKAVGETFLKIYLHIIRQHMRKPWTKEQRETQLIKRGRYVEFNLLYDRGTKFGLMTDGN-PDAIMMSMPPLVKWM |
1TLB Chain:A ((48-300)) | ---------------------------------------------GGGGTSMVIQDGTTFEKGGVNVSVVYGQLSPAAVSAMKADHKNLRLPEDPKTGLPVTDGVKFFACGLSMVIHPVNPHAPTTHLNYRYFETWNQDGTPQTWWFGGGADLTPSYLYEEDGQLFHQLHKDALDKHDTALYPRFKKWCDEYFYITHRKETRGIGGIFFDDYDERDPQEILKMVEDCFDAFLPSYLTIVKRRKDMPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPGSRVESILMSLPEHASWL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TLB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81329 for 1781 contacts (-45.7/contact) +
2D Compatibility (PS) -23935 + (NN) -8824 + (LL) 3432
1D Compatibility (HY) -17200 + (ID) 5200
Total energy: -133056.0 ( -74.71 by residue)
QMean score : 0.423
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