Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKRYIDSKKENRVDFILRNHGMSVIIMAVIMFLPPVAISVLYFFDIYDQHTNIEINLLVSTLVTLFIVYNVKHYRYLLNIIEFQNAIFANALNHNTEFCLILHKNEDVVYADARFYERFKDYIDNDVTLGKILEVGDISEKDKKALYQALKNNSSVQVRIVLSKKSRISSFLLLCEPIPDNPQIAINSNKILNLSLAPIARPHGYFVLKATQMNKEQVYEELIEKHNIGTYIANTKGIILSVNKRFLDMFELKKLEKGSSINDFIFQSKYNNVATDNNILFFTVNGVPFKAYMSTAMFCDKHHHSYIYGLITPVESNVIDYQLHPCFANSSIAIAQCDVNGSFIKKNTALIKLAGPDNSSIFTLISDDYHMKIREYFLSNRINNASFDVQLNNNDNMKIYFNKFLHNRMMFILCYFVDNTEHKNLEIKLEHYQKMQAIGQLAGGIAHDFNNILTGIIGFCDLLLLQHSAGDPSF--GDIIQIQQNAKRGSNLVKQLLAFSRRQTMQPKI----IDVNSTIANLCEMIKRLIGENIKFTTYYG-------RDLGMVRADQGQLEQVILNLAVNASAAMEKGGELTIRTFNKKIDSLNSTPQGMFSPDKEAIEHGNYVMIEVIDTGCGMVSDTVEKVFDPFFSTKDITSGTGLGLSTVYGIIKQTEGYIYVASEVNCGTKFSIFLPMVYISDENHREKGSEEIEKPVVNEVKDNGIILLIEDEDSVREFITKALKRKGFDVIEASMGSKALEIISKKNQHIDLIITDVIMPEVSGPEIVKEALIHRPDINVIFISGYTEDAFLKNDNINIEDFHFLPKPFTLSELGNKVQSVLHKAKKAV |
4U7N Chain:A ((39-261)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSNVSHELRTPLTSLRSYIEALS-DGAWKDPEVAPGFLKVTQEETDRMIRMINELLSLSRMDSGTTRVDMELVNINEMFNYVLDRFDMILKKDDN---YYTIKREFTKRDL-WVEIDTDKFTQVLDNIMNNAIKYSPDGGVVTCR----------------------LLETHNQVIISISDQGLGIPRADLGHVFDRFFR-------TGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISLPYE-------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U7N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120401 for 1367 contacts (-88.1/contact) +
2D Compatibility (PS) -20491 + (NN) -6491 + (LL) 45276
1D Compatibility (HY) -14000 + (ID) 2800
Total energy: -118907.0 ( -86.98 by residue)
QMean score : 0.439
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