Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNIIHPNLEKSINNWFETQFNSLTLPFYNSIDLRNSGYKIAPIDANLFPAGFNNLSEMSKATTAELMRSYFEGKQHKRVLIIPENYTRNKMYIENVFAIEVILQQAGFETRIGLFHNEAYNLIEPYETIVKENSLLKTTSGFMPDVIILNRDMTSHIPDMLENVKQEIIPSPLYGWHSRQKFKYFKIYKKLVSEFCSEFKIDPWLISAFTEGCDEVDFNDDSPLETVATKVDQVLSLVQKKYEEYGIKTQPYVFIKASNGTYGMGIITATSGEEILT-LNKKKRHKMKKIKEGIEVNSVIIQEGVPTIDIFECSPAEPLIYYIGNTPTC-YLYRCNSRKDIYSSLNSTNCKFYDVSQVVENKTLSLWGTVSKLAVLALAVEMRSFHI |
| 1GSA Chain:A ((157-240)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IILKPLDGMGGASIFRVKEGDPNLGVIAET----L---TE-HGTRYCMAQNYLPAIK-----DGDKRVLVVDGEPVPYCLARIPQGGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIGDR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13850 for 458 contacts (-30.2/contact) +
2D Compatibility (PS) -9148 + (NN) -9516 + (LL) 18528
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -18286.0 ( -39.93 by residue)
QMean score : 0.302
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