Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNILYRIDKQLSDFTKTEKIIADYILKNPHKIIDMTVNDLADVTNVSTASIVRFSRKMTHQGFQELKIAISRYLPEDIATNPHLELIENESVETLKN--KMIARATNTMRFVATNIMDAQIDAI------C-------DVLKNARTIFLFG----FGASSLTIGDLFQKLSRIGLNVRLLHETHLLVSTFATHDDRDCMIFVTNQGSHSELQSIAQVATHYSIPIITIS-----STANNPVAQIADYALIYGRTDENEMRMAATTSLFAQLFTVDILYYRFVALNYHAILDCITQSKMALDNYRKHLATIDFKH |
| 3PEW Chain:A ((114-340)) | --------------FEKNKQINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDT----QLVLFSATFADAVRQYAKKIVPNANTLE-LQTN--EVNVDAIKQLYMDCKNEADKFDVLTELYGVMTIGSSIIFVATKKTANVLYGKLKSEG------HEVSILHGDLQTQ-ERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTLANGQADPATYIHRIGRT------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PEW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58561 for 1287 contacts (-45.5/contact) +
2D Compatibility (PS) -20859 + (NN) 168 + (LL) 7992
1D Compatibility (HY) -11200 + (ID) 2900
Total energy: -85360.0 ( -66.32 by residue)
QMean score : 0.239
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