Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQRPKIVAELSANHNQDLNLAKESLHAIKES--GADF---VKLQTYTPSCMTLDSKEDPFIIQGTLWDKENLYGLYQKASTPL--EWHAELFELAKKLDLGIFSSPFSSKALELLESLDCPMYKIASFEIVDLDLIEKAARTQKPIILSSGIATHAELQDAIS--LCRGVNNFDITLLKCVSAYPSKIEDAHLLSMVKLGETF-GVKFGLSDHTIGSLC-PI-LATTLGASMIEKHFILNKSLQTPDSAFSMDFNGFKSMVGAIKQSVLALGE-EEPKINPKTLEERRFFARSLFVIKDIQKGEALTSDNIK-ALRPNLGLHPKFYKEILGQKASKFLK--ANTPLSADDIERAL |
| 3G8R Chain:A ((5-327)) | ---KPLFIFEMANNHMGNVEHGVALIRAIRESCQGFDFDFGFKLQY-----RNLDT-----FIHSSFKGRDDVKYVKRFEETRLQPEQMQKLVAEMKANGFKAICTPFDEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAGARREDIDKVVSFMLHRGK---DLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHEDPDLMEPIMLAVAQGATVFEKHVGL-PTDQYGINNYSANPEQVRRWLAAAARALAMLGDGEDDAVSETEQASLRSLRRGVFATRPVAAGEALTADNVSFAFPPVEG-------QLTANEWSKYVRYTAKTPIAADAPVMAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121392 for 2223 contacts (-54.6/contact) +
2D Compatibility (PS) -33106 + (NN) -13608 + (LL) 944
1D Compatibility (HY) -18000 + (ID) 4600
Total energy: -189762.0 ( -85.36 by residue)
QMean score : 0.484
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