Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLILFNRNAFLLACMFVSSVYANAVLDAYAVENPYITITLTSLLAPLSMLAFLKTPRNSAFALGFFVGALLFYWCALSFRYSDFTYLLPLIIVLVALVYGVLFYLLLYFENPYFRLLSFLGSSFIHPFGFDWLVPDSFFSYSVFRVDKLSLGLIFLACIFLSAQNLKKYRMIGVLLLLGALDFHFFKISDLKEVGNIELVSTRTPQDLKFDSNYLNNIENNILKEIKLAQSKQKTLIVFPETAYPIALENS---------PFKTQLEDLSD--KIAILIGTLRAQGYSLYNSSFLFSK-KSVQIADKVILAPFGEIMPLPEFLQKPLEKLFFGESAYLYRNAPHFSDFTLDDFTFRPLICYEGTSKPAYSS---------SPSKVFILMSNNAWFSPSIEPTLQRTLLKYYARRYDKIILHSAN----------FSTSYILSPSLLGDILFRKRS |
| 2E11 Chain:A ((2-230)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HDLRISLVQGSTRW-HDP-----AGNRDYYGALLEPL-AGQSDLVILPETFTSGFSNEAIDKAEDMDGPTVAWIRTQAARLGAAITGSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNE------------HL-------RYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRFDVERPGQLDFDLQLFVAN--WPSAR--AYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFL--GQPQVEIRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E11.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112055 for 1681 contacts (-66.7/contact) +
2D Compatibility (PS) -21284 + (NN) -7365 + (LL) 19556
1D Compatibility (HY) -2800 + (ID) 1650
Total energy: -125598.0 ( -74.72 by residue)
QMean score : 0.542
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