Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSKSLEALHHVKRYRKRELFDPLLKDYASNDYLGLSVKKDLLQNAFDKLQSFDCHSPKASMLVNGYHPLHAELEERLADLLEFESALLVGSGFLGNLALIDTLLVKNALLFMDAHYHASGIFSTKIKPNQVIFFSHNDIKDLKQKLFNAPKNKLKFIAIEGVYSMDASIAPYDFYEIIQETPNAFLIVDEAHSFGTIGENLLGFLEYHRIKEKDKIIKLSTFSKALASYGACVLAPLQVIEFLTNRAKSVIYTTAL--SLLDTALTLAHLEYFIAQKQE--LKNELSKHQQIIFETLGVRTPT-----GFFTLEFENNPALLNAQYFLKEKGFLVGAIRPPTVSKP--LLRVSLSLKNSLEDTKELANALLDYSKIQSSFKSG |
2XBN Chain:A ((73-397)) | -------------------------------NYMGMTFDPDVIAAGKEALEKFGSGTNGSRMLNGTFHD-HMEVEQALRDFYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFV-VGTFSKSVGTVGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGL--KAMGFRLGTETCDSAIVAVMLEDQEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGVI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XBN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185973 for 2686 contacts (-69.2/contact) +
2D Compatibility (PS) -33980 + (NN) -11231 + (LL) 3192
1D Compatibility (HY) -22000 + (ID) 4400
Total energy: -254392.0 ( -94.71 by residue)
QMean score : 0.484
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