Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTLGRFLRLTTFGESHGDMIGGVLDGMPSGIKIDYDLLENEMKRR-----QGGRNIFTTPRKEDDKVEITSGVFEGFSAGTPIGFLIHNQR---------ARSKDYDNIKNLF--------RPSHADFTYFHKYGIRDFRGG-GRSSARESAIRVAAGAFAKMLLRE-IGVVCESGIIKIG------GIEAKNYDFNHALKSEIFALDKEQEEAQKTAIQNAIKNHDSIGGVALIRARGAKTNQKLPIGLGQGLYA--KLDAKIAEAMMGLNGVKAVEIGKGVESSLLKGSEYNDLM--SQKGFL--SNHSGGVLGGMSNGEEIIVKVHFKPTPSIFQPQRTIDIKGNECECLLKGRHDPCIAIRGSVVCESLLSLVLADMVLLNLTSKIEYLKTIYNEN |
| 2G85 Chain:A ((1-367)) | ------MLRWITAGESHGRALVAVVEGMVAGVHVTSADIADQLARRRLGYG------F-----ERDAVTVLSGIRHGSTLGGPIAIEIGNTEWPKWETVMAADPVDPAELADVARNAPLTRPRPGHADYAGMLKYGFDDARPVLERASARETAARVAAGTVARAFLRQALGVEVLSHVISIGASAPYEGPPPRAEDLPAIDASPVRAYDKAAEADMIAQIEAAKKDGDTLGGVVEAVALG------LPVGLGSFTSGDHRLDSQLAAAVMGIQAIKGVEIGDGFQTARRRGSRAHDEMYPGPDGVVRSTNRAGGLEGGMTNGQPLRVRAAMKPISTVPRALATVDLATGDEAVAIHQRSDVCAVPAAGVVVETMVALVLARAALEKFGGDSLAETQRNIAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G85.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158359 for 2664 contacts (-59.4/contact) +
2D Compatibility (PS) -35524 + (NN) -17791 + (LL) 776
1D Compatibility (HY) -15200 + (ID) 6000
Total energy: -232098.0 ( -87.12 by residue)
QMean score : 0.406
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