Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRHVIAFGLKIEILKKYK--RTLQAHDDLRQ-LEPLGFENTQGSVYLKDQ
1X8D Chain:A ((1-45))
MIRKAFVMQVN-PDAHEEYQRRHNPIWPELEAVLKSHGAHN--YAIYLDKA
General information:
TITO was launched using:
RESULT:
Template:
1X8D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2452 for 151 contacts (-16.2/contact) +
2D Compatibility (PS) -4310 + (NN) 1106 + (LL) 376
1D Compatibility (HY) -800 + (ID) 450
Total energy: -6530.0 ( -43.25 by residue)
QMean score : 0.179
(partial model without unconserved sides chains):
PDB file :
Tito_1X8D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X8D-query.scw
PDB file :
Tito_Scwrl_1X8D.pdb
: