Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIVQKYGGTSMGSIERIHNVAQRVLESVKLGHQVVVVVSAMSGETDRLLEFG----------------------------KNFSHNPN-----------------------KREMDRIVSAGEWISSAALSMALERYGHRAISLSGKEAGILTSSHFQNAVIQSIDTQRITELLEKNY-----IVVIAGFQGADIQ-GETTTLGRGGSDLSAVALAGALKAHLCEIYTDVDGVYTTDPRIEEKAQKIAQISYDEMLELASMGAKVLLNRSVELAKKLSVKLVTRNSFN-HSEGTLIVAEKDFKGERMETPIVSGIALDKNQARVSMEGVE--DRPGIAAEIFGALAEYRINVDMIVQTIGRDGKTDLDFTIVKTQI---EETKQALKPFLAQMDSI---DYDENIAKVSIVGVGMKSHSGVASIAFKALAKDNINIMMIS--TSEIKISVLIDIKYAELAVRTLHAVYQLDQ |
| 2CDQ Chain:A ((30-482)) | ---VMKFGGSSVASAERMKEVADLILTFPE--ESPVIVLSAMGKTTNNLLLAGEKAVSCGVSNASEIEELSIIKELHIRTVKELNIDPSVILTYLEELEQLLKGIAMMKELTLRTRDYLVSFGECLSTRIFAAYLNTIGVKARQYDAFEIGFITTDDFTNGDILEATYPAVAKRLYDDWMHDPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGEIPVRVKNSYNPKAPGTIITKTRD-----MTKSILTSIVLKRNVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVATS-----EVSISLTLDPSKLWSRELIQQELDHVVEELEKIAVVNLLKGRAIISLIG-NVQHSSLILERAFHVLYTKGVNVQMISQGASKVNISFIVNEAEAEGCVQALHKSFFESG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195801 for 3196 contacts (-61.3/contact) +
2D Compatibility (PS) -42338 + (NN) -16828 + (LL) 896
1D Compatibility (HY) -29600 + (ID) 6000
Total energy: -289671.0 ( -90.64 by residue)
QMean score : 0.485
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